Software and Workflows

Software and Workflows
Badlands
Bayeslands
GPlates
pyGPlates
Underworld
PyBacktrack

Kinematic and geodynamic evolution of the Isthmus of Panama region: Implications for Central American Seaway closure

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Abstract: A major topic of debate in Earth and climate science surrounds the timing of closure of the Central American Seaway. While it is clear that the gateway was closed by ~2.8 Ma, recent studies based on geological and marine molecular evidence have suggested an earlier closing time of early to mid-Miocene. Here, we examine … Read more…

Sea level fluctuations driven by changes in global ocean basin volume following supercontinent break-up

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Abstract: Long-term variations in eustatic sea level in an ice-free world, which existed through most of the Mesozoic and early Cenozoic eras, are partly driven by changes in the volume of ocean basins. Previous studies have determined ocean basin volume changes from plate tectonic reconstructions since the Mesozoic; however, these studies have not considered a … Read more…

A Quantitative Tomotectonic Plate Reconstruction of Western North America and the Eastern Pacific Basin

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Abstract: Plate reconstructions since the breakup of Pangaea are mostly based on the preserved spreading history of ocean basins, within absolute reference frames that are constrained by a combination of age-progressive hotspot tracks and palaeomagnetic data. The evolution of destructive plate margins is difficult to constrain from surface observations as much of the evidence has … Read more…

PyGPlates now supports Python 3

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PyGPlates now supports Python 3.  You can download pyGPlates:   http://www.gplates.org/download.html What’s new in pyGPlates revision 28:- Windows and macOS support for Python 2.7, 3.5, 3.6, 3.7 and 3.8. macOS libraries signed and notarized by Apple (should no longer get security prompts). Ubuntu support for 16.04 LTS (Xenial), 18.04 LTS (Bionic), 19.10 (Eoan) and 20.04 LTS (Focal). Create topological features (dynamic … Read more…

PyBacktrack 1.3 now available as a Python package and a Docker image.

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PyBacktrack 1.3 is now available as a Python package and a Docker image. The documentation is available at: https://pybacktrack.readthedocs.io/en/latest/ Changes since version 1.2: Supports Python 3: please also use the recent pyGPlates Python 3 release. Added the following output columns: dynamic_topography: change in dynamic topography elevation since present day decompacted_depth: depth from fully decompacted layers (using surface porosity only) … Read more…

GPlates Portal passes 1 million views!

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Just in time for science week, our #AuScope supported GPlates Portal has passed 1 million views! The most popular globe remains the vertical gravity gradient globe which highlights the Earth’s lithospheric structure, followed by our seafloor lithology globe. For #ScienceWeek our portal guru Michael Chin has created a new globe for reconstructing the SRTM15 digital elevation model. Check it … Read more…

GPlates x Digital Directory: re-linking people with earth system science in an opportune moment of pause

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COVID-19 has stimulated both major behavioural change during lockdown; and new thoughts, experiments and even dreams as many of our human-created systems have come to a raging halt. As the traffic dims, we have the opportunity to ‘remind ourselves that we are embedded in a more-than-human world — and have some fun along the way … Read more…

Update to the Muller et al. (2019) plate reconstructions

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The GPlates team has updated the relative and absolute plate motions in the Muller et al. (2019) reconstructions.  The details of the updates are summarised below. Version 2.0 of the model (including GPlates files, age-grids, global and regional animations, stretching factor grids, etc.) are available to download from this link. The Muller et al. (2019) … Read more…

Bayeslands: A Bayesian inference approach for parameter uncertainty quantification in Badlands

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Abstract: Bayesian inference provides a rigorous methodology for estimation and uncertainty quantification of unknown parameters in geophysical forward models. Badlands is a landscape evolution model that simulates topography development at various space and time scales. Badlands consists of a number of geophysical parameters that needs estimation with appropriate uncertainty quantification; given the observed present-day ground truth … Read more…

GPlates 2.2 software and data sets

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GPlates Title Logo

GPlates 1.5 PromoGPlates is a free desktop software for the interactive visualisation of plate-tectonics. The compilation and documentation of GPlates 2.2 data was primarily funded by AuScope National Collaborative Research Infrastructure (NCRIS).

GPlates is developed by an international team of scientists and professional software developers at the EarthByte Project (part of AuScope) at the University of Sydney, the Division of Geological and Planetary Sciences (GPS) at CalTech, the Geodynamics team at the Geological Survey of Norway (NGU) and the Centre for Earth Evolution and Dynamics (CEED) at the University of Oslo. … Read more…

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PyBacktrack 1.1 has been released as Python package and Docker image

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PyBacktrack is a Python package that backtracks the paleo-water depth of ocean drill sites through time by combining a model of tectonic subsidence with decompaction of the site stratigraphic lithologies. PyBacktrack can also include the effects of mantle-convection driven dynamic topography on paleo-water depth, as well as sea-level variations. PyBacktrack provides a model of tectonic … Read more…

Muller et al. (2019) deforming plate reconstructions and associated digital supplements (Tectonics)

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A Global Plate Model Including Lithospheric Deformation Along Major Rifts and Orogens Since the Triassic R. Dietmar Müller, Sabin Zahirovic, Simon E. Williams, John Cannon, Maria Seton, Dan J. Bower, Michael G. Tetley, Christian Heine, Eline Le Breton, Shaofeng Liu, Samuel H. J. Russell, Ting Yang, Jonathon Leonard, and Michael Gurnis Journal: Tectonics (open access) … Read more…

AuScope reviews innovations of the ARC Basin Genesis HUB

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Sedimentary basins around the world are critical to sustaining modern life on Earth. These basins can be thought of as containers that hold water, minerals, energy, and can potentially be used to store carbon dioxide. Unpacking how they form, and where those resources and storage opportunities may lie is a sizeable feat for the best … Read more…

GPlates-in-schools!

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Maria Seton attended Marist College North Shore (Sydney) earlier this week and gave a presentation on “computerised simulations and models of the Earth’s geological history” to a keen group of senior science students. Part of this presentation involved leading a hands-on GPlates activity with the students (see photo). It was a hit and seeing plate … Read more…

Interactive virtual gravity globe, based on BGI’s global gravity grids by Bonvalot et al. (2012)

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Ready for a fresh start in 2019, our web development guru Michael Chin has created a new interactive virtual gravity globe, based on BGI’s global gravity grids by Bonvalot et al. (2012). The virtual globe allows the user to visualise either Bouguer or isostatic gravity anomalies. The latter has both the effect of surface and … Read more…

Two New Sloan Foundation Grants for Deep Carbon Science

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The Alfred P. Sloan Foundation recently announced two new Officer’s Grants for deep carbon science, supporting important community building and modeling efforts. These new projects will invigorate a community of scientists committed to understanding the evolution of deep carbon through deep time through 2019 and beyond. “Carbon Down Under: Galvanizing Australia’s research community for the … Read more…

New interactive rift obliquity globe on the GPlates Portal

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The ARC Basin Genesis Hub has made a new interactive rift obliquity globe available on the GPlates Portal at http://portal.gplates.org/cesium/?view=rift_ov, based on a recently published paper entitled “Oblique rifting: the rule, not the exception” in Solid Earth. This virtual globe visualizes extension velocities and obliquities within Earth’s major post-Pangea rift systems. Each circle depicts the … Read more…

GPlates 2.1 released (and pyGPlates revision 18)

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GPlates Title Logo

GPlates 2.1 was released today! Many bugs have been fixed, including the computation of crustal thinning factors. NetCDF-4 is now supported for raster import/export, i.e. GPlates 2.1 can now read and write GMT-5 grids. Many thanks to the GPlates development team and especially to Sabin Zahirovic without whose tireless efforts GPlates 2.1 would not have … Read more…

Tectonic evolution and deep mantle structure of the eastern Tethys since the latest Jurassic

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Sabin Zahirovic, Kara J. Matthews, Nicolas Flament, R. Dietmar Müller, Kevin C. Hill, Maria Seton, Michael Gurnis Earth-Science Reviews Citation: Zahirovic, S., Matthews, K.J., Flament, N., Müller, R.D., Hill, K.C., Seton, M. and Gurnis, M., 2016, Tectonic evolution and deep mantle structure of the eastern Tethys since the latest Jurassic, Earth Science Reviews, 162, 293-337. The … Read more…

GPlates: Building a Virtual Earth Through Deep Time

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A paper about the GPlates software has been published in G-cubed. The GPlates virtual globe software provides the capability to reconstruct geodata attached to tectonic plates to develop and modify models that describe how the plates and their boundaries have evolved through time. It allows users to deform plates and to visualize surface tectonics in … Read more…

GPlates 2.1 software and data sets

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GPlates Title Logo

GPlates 1.5 PromoGPlates is a free desktop software for the interactive visualisation of plate-tectonics. The compilation and documentation of GPlates 2.1 data was primarily funded by AuScope National Collaborative Research Infrastructure (NCRIS).

GPlates is developed by an international team of scientists and professional software developers at the EarthByte Project (part of AuScope) at the University of Sydney, the Division of Geological and Planetary Sciences (GPS) at CalTech, the Geodynamics team at the Geological Survey of Norway (NGU) and the Centre for Earth Evolution and Dynamics (CEED) at the University of Oslo. … Read more…

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The Interplay Between the Eruption and Weathering of Large Igneous Provinces and the Deep-Time Carbon Cycle

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Abstract: Although many sources of atmospheric CO2 have been estimated, the major sinks are poorly understood in a deep-time context. Here we combine plate reconstructions, the eruption ages and outlines of Large Igneous Provinces (LIPs), and the atmospheric CO2 proxy record to investigate how their eruptions and weathering within the equatorial humid zone impacted global … Read more…

PyBacktrack 1.0: a tool for reconstructing paleobathymetry on oceanic and continental crust

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The pyBacktrack software package allows the backtracking of the paleo-water depth of ocean drill sites, providing a framework for reconstructing the accumulation history of sediment components through time. The software incorporates the effects of decompaction of common marine lithologies and allows backtracking of sites on both oceanic and continental crust.  Backtracking on ocean crust is based on … Read more…

Workshop on “Bayeslands: Bayesian inference for Badlands”

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Overview: In recent years, the Bayesian inference has become a popular methodology for the estimation and uncertainty quantification of parameters in geological and geophysical forward models via the posterior distribution. Badlands is a basin and landscape evolution model for simulating topography development at various space and time scales. This workshop will present  BayesLands which provides … Read more…

pyBadlands: A framework to simulate sediment transport, landscape dynamics and basin stratigraphic evolution through space and time

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Abstract Understanding Earth surface responses in terms of sediment dynamics to climatic variability and tectonics forcing is hindered by limited ability of current models to simulate long-term evolution of sediment transfer and associated morphological changes. This paper presents pyBadlands, an open-source python-based framework which computes over geological time (1) sediment transport from landmasses to coasts, … Read more…

Oceanic crustal carbon cycle drives 26 million-year atmospheric carbon dioxide periodicities

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Citation: Müller, R.D. and Dutkiewicz, A., 2018, Oceanic crustal carbon cycle drives 26 million-year atmospheric carbon dioxide periodicities, Science Advances, 4:eaaq0500, 1-7. Atmospheric carbon dioxide (CO2) data for the last 420 million years (My) show long-term fluctuations related to supercontinent cycles as well as shorter cycles at 26–32 My whose origin is unknown. Periodicities of 26–30 … Read more…

Improving global paleogeography since the late Paleozoic using paleobiology

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Author List: Wenchao Cao, Sabin Zahirovic, Nicolas Flament, Simon Williams, Jan Golonka, Dietmar Müller Citation: Cao, W., Zahirovic, S., Flament, N., Williams, S., Golonka, J., and Müller, R. D., 2017, Improving global paleogeography since the late Paleozoic using paleobiology: Biogeosciences, v. 14, no. 23, p. 5425-5439. Paleogeographic maps, linked to plate tectonic reconstructions, are key components required for climate models … Read more…

Kinematic constraints on the Rodinia to Gondwana transition

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Author List: Andrew Merdith, Simon Williams, Dietmar Müller & Alan Collins. Citation: Merdith, Andrew & Williams, Simon & Müller, Dietmar & Collins, Alan. (2017). Kinematic constraints on the Rodinia-Gondwana transition. Precambrian Research. 299. . 10.1016/j.precamres.2017.07.013. Abstract: Earth’s plate tectonic history during the breakup of the supercontinent Pangea is well constrained from the seafloor spreading record, but evolving plate configurations during … Read more…

Tectonic speed limits from plate kinematic reconstructions

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Abstract The motion of plates and continents on the planet’s surface are a manifestation of long-term mantle convection and plate tectonics. Present-day plate velocities provide a snapshot of this ongoing process, and have been used to infer controlling factors on the speeds of plates and continents. However, present-day velocities do not capture plate behaviour over … Read more…